Fitness data for BPHYT_RS03890 in Burkholderia phytofirmans PsJN

C4-dicarboxylate ABC transporter substrate-binding protein
SEED: TRAP-type uncharacterized transport system, periplasmic component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.3 compare
nitrogen source NAG (N) -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.3 compare
phage 24hr PHYTO6 MOI 0.1 -0.4 -1.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.3 -1.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.4 compare
vitamin With vitamins t2 -0.3 -1.5 compare
phage 24hr PHYTO2 MOI 1 +0.3 +1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare
no phage control No phage control +0.4 +2.1 compare
phage P. phyto PHYTO2 MOI 0.1 +0.4 +2.1 compare
nophagecontrol 24hr Phyto Lib only +0.4 +1.9 compare
phage P. phyto corn MOI 1 +0.4 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.4 compare
carbon source Phenylacetic 5 mM (C) +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.4 compare