Fitness data for BPHYT_RS03470 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Hydrogen peroxide-inducible genes activator
KEGG: LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.7 -3.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.9 -3.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.4 -5.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.3 -3.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.7 compare
carbon source Protocatechuic Acid (C) +1.1 +7.4 compare
phage P. phyto PHYTO2 MOI 1 +1.1 +5.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +5.6 compare
phage 24hr PHYTO4 MOI 10 +1.2 +6.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.2 +3.8 compare
stress Bacitracin 0.25 mg/ml +1.2 +6.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +5.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +1.4 +4.0 compare
carbon source succinate (C) +1.4 +6.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.5 +5.7 compare
stress Nickel (II) chloride 1 mM +1.5 +9.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +5.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.7 +7.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.8 +7.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.9 +9.5 compare