Fitness data for BPHYT_RS03400 in Burkholderia phytofirmans PsJN

ATP-dependent DNA helicase RecG
SEED: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
KEGG: ATP-dependent DNA helicase RecG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.2)


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group condition fitness t score  
pH LB, pH7 -3.5 -1.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -3.2 -0.9 compare
motility outer cut, LB soft agar motility assay -3.2 -1.1 compare
motility outer cut, LB soft agar motility assay -3.2 -1.2 compare
motility inner cut, LB soft agar motility assay -3.1 -1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -3.1 -1.6 compare
supernatant control Vogels_fungal_media 0.1X -3.1 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -3.0 -0.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.9 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.9 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -0.8 compare
nutrient L-Histidine -2.5 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -2.4 -1.1 compare
lb LB -2.3 -1.9 compare
carbon source D-Glucosamine Hydrochloride (C) -2.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -2.3 -2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.2 -0.9 compare
carbon source L-Alanine (C) -2.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.2 -0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.2 -0.8 compare