Fitness data for BPHYT_RS03260 in Burkholderia phytofirmans PsJN

glycine cleavage system regulatory protein
SEED: Glycine cleavage system transcriptional activator GcvA
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. phyto PHYTO2 MOI 1 -1.2 -2.9 compare
carbon source D-Glucose (C) -0.9 -2.8 compare
phage 36hr PHYTO11 MOI 0.1 -0.9 -2.6 compare
temperature LB, 37C -0.9 -2.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -1.9 compare
phage 24hr PHYTO4 MOI 0.1 -0.8 -1.3 compare
phage PHYTO3 MOI 0.1 -0.8 -2.0 compare
phage 24hr PHYTO1 MOI 1 -0.7 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -2.7 compare
phage 24hr PHYTO2 MOI 1 -0.7 -1.4 compare
phage 24hr PHYTO9 MOI 10 -0.7 -1.0 compare
phage 36hr PHYTO10 MOI 10 -0.7 -1.4 compare
phage 24hr PHYTO8 MOI 1 -0.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 compare
phage 36hr PHYTO4 MOI 1 -0.6 -1.1 compare
carbon source Sebacic (C) +0.6 +1.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 +2.6 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +3.4 compare