Fitness data for BPHYT_RS03060 in Burkholderia phytofirmans PsJN

MFS transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 1 -0.6 -2.3 compare
phage 24hr PHYTO6 MOI 0.1 -0.6 -2.4 compare
phage 36hr PHYTO8 MOI 0.1 -0.6 -2.0 compare
motility outer cut, LB soft agar motility assay -0.5 -1.9 compare
phage 36hr PHYTO4 MOI 1 -0.5 -2.0 compare
phage 24hr PHYTO11 MOI 0.1 -0.5 -2.2 compare
phage 36hr PHYTO1 MOI 1 -0.5 -1.6 compare
phage 24hr PHYTO1 MOI 10 -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.7 compare
carbon source L-Fucose (C) -0.4 -1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
carbon source Malonic (C) +0.5 +1.6 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare
nitrogen source L-Isoleucine (N) +0.5 +2.0 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.8 +2.8 compare