Fitness data for BPHYT_RS02905 in Burkholderia phytofirmans PsJN

RNA polymerase subunit sigma-54
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-54 factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.0)


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group condition fitness t score  
nitrogen source Uridine (N) -6.5 -22.3 compare
nitrogen source Carnitine Hydrochloride (N) -6.4 -24.0 compare
carbon source succinate (C) -5.8 -27.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -5.8 -21.4 compare
nitrogen source D-Alanine (N) -5.4 -21.7 compare
nitrogen source Putrescine (N) -5.3 -18.5 compare
nitrogen source L-Proline (N) -5.2 -20.5 compare
nitrogen source L-Alanine (N) -5.1 -21.6 compare
nitrogen source NAG (N) -4.9 -20.3 compare
nitrogen source L-Lysine (N) -4.8 -14.7 compare
vitamin With vitamins t2 -4.2 -19.2 compare
nitrogen source L-Serine (N) -4.2 -15.2 compare
carbon source propionate (C) -4.1 -24.2 compare
carbon source L-Malic (C) -4.1 -23.4 compare
carbon source Tween 20 (C) -3.9 -15.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -3.6 -22.0 compare
nitrogen source L-Phenylalanine (N) -3.6 -15.8 compare
vitamin No vitamins t2 -3.6 -21.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -3.0 -17.4 compare
nitrogen source Ammonium chloride (N) -3.0 -17.1 compare