Fitness data for BPHYT_RS02900 in Burkholderia phytofirmans PsJN

ribosome hibernation promoting factor
SEED: Ribosome hibernation protein YhbH
KEGG: putative sigma-54 modulation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.7 -3.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -4.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -1.4 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.2 -1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.2 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.9 compare
phage 36hr PHYTO6 MOI 10 -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.7 compare
nitrogen source L-Alanine (N) +0.8 +1.9 compare
nophagecontrol 24hr Phyto Lib Only +0.8 +2.5 compare
nitrogen source L-Glutamic (N) +0.8 +1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9 +1.5 compare
phage 24hr PHYTO1 MOI 10 +1.0 +2.6 compare
carbon source succinate (C) +1.8 +8.0 compare