Fitness data for BPHYT_RS02870 in Burkholderia phytofirmans PsJN

formamidopyrimidine-DNA glycosylase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.9 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.9 compare
motility outer cut, LB soft agar motility assay -0.4 -2.4 compare
nitrogen source Ammonium chloride (N) -0.4 -2.0 compare
carbon source L-Proline (C) +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.7 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +1.6 compare
carbon source D-Glucose (C) +0.4 +2.4 compare
phage P. phyto PHYTO2 MOI 1 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4 +2.5 compare
carbon source L-Glutamine (C) +0.4 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
carbon source D-Galacturonic Acid (C) +0.5 +3.1 compare
phage 36hr PHYTO6 MOI 1 +0.5 +2.0 compare
stress Bacitracin 0.25 mg/ml +0.5 +2.9 compare
phage 24hr PHYTO7 MOI 10 +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.7 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.8 compare