Fitness data for BPHYT_RS02800 in Burkholderia phytofirmans PsJN

5-carboxymethyl-2-hydroxymuconate isomerase
SEED: Fumarylacetoacetase (EC 3.7.1.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -2.0 compare
phage 24hr PHYTO10 MOI 10 -0.6 -2.2 compare
nophagecontrol 24hr Phyto Lib Only -0.5 -2.0 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.3 compare
carbon source Phenylacetic 5 mM (C) -0.4 -1.5 compare
carbon source L-Histidine (C) +0.4 +2.0 compare
carbon source L-Asparagine (C) +0.4 +2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.6 compare
nitrogen source Putrescine (N) +0.5 +2.2 compare
carbon source L-Fucose (C) +0.5 +2.1 compare
phage P. phyto PHYTO2 MOI 1 +0.5 +1.6 compare
carbon source L-Arabinose (C) +0.5 +2.2 compare
stress Paraquat dichloride 0.032 mg/ml +0.5 +1.6 compare
carbon source D-Lactate (C) +0.5 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
carbon source D-Galacturonic Acid (C) +0.6 +2.0 compare
nitrogen source L-Isoleucine (N) +0.6 +2.0 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.6 +3.2 compare
carbon source D,L-Lactate (C) +0.7 +3.2 compare