Fitness data for BPHYT_RS02745 in Burkholderia phytofirmans PsJN

N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data)
Original annotation: PTS system N-acetylglucosamine-specific transporter subunit IIBC
SEED: PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component
KEGG: PTS system, N-acetylglucosamine-specific IIB component ; PTS system, N-acetylglucosamine-specific IIC component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source NAG (C) -2.6 -6.7 compare
nitrogen source NAG (N) -2.5 -7.7 compare
phage 36hr PHYTO4 MOI 1 -0.7 -3.1 compare
stress Nickel (II) chloride 1 mM -0.7 -4.0 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.6 -2.2 compare
phage 36hr PHYTO9 MOI 0.1 -0.6 -2.3 compare
phage 24hr PHYTO1 MOI 1 -0.5 -2.5 compare
motility inner cut, LB soft agar motility assay -0.5 -2.8 compare
phage 24hr PHYTO11 MOI 0.1 -0.5 -2.3 compare
phage 24hr PHYTO10 MOI 10 -0.4 -1.9 compare
phage 24hr PHYTO6 MOI 0.1 -0.4 -2.1 compare
r2a control R2A control -0.4 -2.2 compare
vitamin No vitamins t2 +0.4 +2.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +2.3 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.1 compare
vitamin No vitamins t1 +0.5 +2.7 compare
carbon source D-Glucose (C) +0.6 +3.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.8 +2.6 compare