Fitness data for BPHYT_RS02740 in Burkholderia phytofirmans PsJN

N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data)
Original annotation: PTS glucose transporter subunit IIA
SEED: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) / PTS system, glucose-specific IIA component
KEGG: PTS system, fructose-specific IIA component ; phosphotransferase system, enzyme I, PtsI ; phosphocarrier protein FPr

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source NAG (C) -2.4 -7.0 compare
nitrogen source NAG (N) -1.8 -4.3 compare
nitrogen source L-Lysine (N) -0.9 -3.3 compare
carbon source D-Glucosamine Hydrochloride (C) -0.6 -3.0 compare
carbon source L-Glutamine (C) -0.6 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
carbon source L-Phenylalanine (C) +0.5 +1.8 compare
phage 24hr PHYTO MOI 0.1 +0.5 +2.1 compare
phage 36hr PHYTO8 MOI 10 +0.5 +1.6 compare
phage 36hr PHYTO3 MOI 1 +0.5 +1.4 compare
nutrient Min media with glucose +0.5 +2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.5 +1.7 compare
phage 24hr PHYTO6 MOI 10 +0.5 +1.9 compare
nophagecontrol 24hr Phyto Lib Only +0.5 +3.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.6 compare