Fitness data for BPHYT_RS02725 in Burkholderia phytofirmans PsJN

GntR family transcriptional regulator
SEED: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family
KEGG: GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source D-Glucosamine Hydrochloride (C) -2.5 -4.9 compare
nitrogen source NAG (N) -2.3 -3.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -1.7 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.9 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.4 -2.4 compare
carbon source Malonic (C) -1.2 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -1.1 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -1.6 compare
carbon source NAG (C) -1.1 -2.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.1 -1.6 compare
phage 24hr PHYTO3 MOI 1 +1.1 +2.0 compare
nitrogen source Uridine (N) +1.1 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.1 +1.6 compare
phage 36hr PHYTO4 MOI 1 +1.1 +2.4 compare
carbon source D-Glucose (C) +1.1 +4.4 compare
nutrient Min media with glucose +1.2 +3.6 compare
carbon source D-Glucose (C) +1.2 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.8 compare
nitrogen source L-Lysine (N) +1.4 +3.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.6 +2.9 compare