Fitness data for BPHYT_RS02500 in Burkholderia phytofirmans PsJN

spermidine/putrescine ABC transporter permease
SEED: Thiamin ABC transporter, transmembrane component
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 36hr PHYTO9 MOI 1 -0.5 -2.0 compare
stress Cephalothin 2 mg/ml -0.4 -1.9 compare
phage 24hr PHYTO10 MOI 10 -0.4 -1.5 compare
phage 24hr PHYTO3 MOI 1 -0.4 -2.1 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.4 -1.4 compare
carbon source Disodium Glutarate (C) -0.4 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.4 -2.1 compare
carbon source adipate (C) -0.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.6 compare
phage 24hr PHYTO6 MOI 1 -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
carbon source Phenylacetic 5 mM (C) +0.4 +1.5 compare
nitrogen source L-Glutamine (N) +0.4 +1.8 compare
nitrogen source L-Phenylalanine (N) +0.4 +1.7 compare
phage 24hr PHYTO9 MOI 0.1 +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.8 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.9 compare