Fitness data for BPHYT_RS02265 in Burkholderia phytofirmans PsJN

peptide ABC transporter substrate-binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.3 compare
phage 24hr PHYTO11 MOI 0.1 -0.5 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
phage 24hr PHYTO9 MOI 10 -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
phage 24hr PHYTO9 MOI 0.1 -0.4 -1.7 compare
nitrogen source L-Glutamine (N) -0.3 -2.0 compare
motility outer cut, LB soft agar motility assay -0.3 -1.4 compare
phage 24hr PHYTO1 MOI 10 -0.3 -1.5 compare
phage 36hr PHYTO8 MOI 10 +0.3 +1.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.3 +1.9 compare
vitamin No vitamins t1 +0.4 +2.0 compare
phage 36hr PHYTO6 MOI 10 +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
phage P. phyto PHYTO2 MOI 1 +0.4 +1.7 compare
carbon source Malonic (C) +0.5 +2.0 compare
stress Paraquat dichloride 0.064 mg/ml +0.5 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare