Fitness data for BPHYT_RS02250 in Burkholderia phytofirmans PsJN

Zn-dependent hydrolase
SEED: SoxH protein, homolog

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -1.1 compare
carbon source Phenylacetic 5 mM (C) -0.6 -2.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -3.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.6 compare
stress Paraquat dichloride 0.032 mg/ml -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -1.4 compare
lb LB +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.1 compare
phage 24hr PHYTO10 MOI 10 +0.5 +3.1 compare
motility inner cut, LB soft agar motility assay +0.5 +1.7 compare
carbon source Gly-Glu (C) +0.5 +2.1 compare
pH LB, pH7 +0.5 +2.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.5 +1.2 compare
carbon source Xylitol (C) +0.6 +3.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.9 compare