Fitness data for BPHYT_RS02170 in Burkholderia phytofirmans PsJN

type VI secretion protein
SEED: Protein ImpG/VasA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -0.4 -2.4 compare
phage 36hr PHYTO11 MOI 1 -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.1 compare
carbon source D-Glucose (C) -0.3 -2.6 compare
phage 36hr PHYTO11 MOI 1 -0.3 -2.0 compare
phage 36hr PHYTO4 MOI 0.1 -0.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -1.9 compare
phage 24hr PHYTO11 MOI 1 -0.3 -1.7 compare
phage 24hr PHYTO10 MOI 1 -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.5 compare
phage 36hr PHYTO8 MOI 0.1 -0.3 -1.7 compare
carbon source 2-Deoxy-D-Ribose (C) +0.3 +1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 +2.0 compare
carbon source Azelaic (C) +0.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.5 +2.1 compare