Fitness data for BPHYT_RS01885 in Burkholderia phytofirmans PsJN

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Asparagine (C) -3.0 -12.3 compare
carbon source L-Glutamine (C) -2.6 -10.1 compare
nitrogen source L-Lysine (N) -2.2 -6.7 compare
nitrogen source L-Phenylalanine (N) -1.8 -9.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.5 -8.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 -4.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.3 -6.3 compare
carbon source L-Histidine (C) -1.2 -7.5 compare
carbon source L-Tryptophan (C) -1.2 -7.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.2 -6.8 compare
nitrogen source L-Isoleucine (N) -1.1 -5.7 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.1 -5.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -6.3 compare
nitrogen source L-Glutamic (N) -0.9 -3.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.9 -4.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -4.1 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -5.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -4.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.7 -3.6 compare
nitrogen source L-Citrulline (N) +0.7 +4.8 compare