Fitness data for BPHYT_RS01810 in Burkholderia phytofirmans PsJN

sugar ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galactose (C) -0.9 -5.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -1.7 compare
phage P. phyto PHYTO2 MOI 1 -0.5 -1.1 compare
phage 36hr PHYTO10 MOI 10 +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
carbon source Malonic (C) +0.4 +1.2 compare
carbon source D-Glucose (C) +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
phage 24hr PHYTO10 MOI 10 +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.0 compare
carbon source adipate (C) +0.5 +2.4 compare
carbon source Malonic (C) +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.4 compare
nitrogen source L-Lysine (N) +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.7 compare