Fitness data for BPHYT_RS01650 in Burkholderia phytofirmans PsJN

23S rRNA methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -2.2 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -2.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.3 -1.7 compare
temperature LB, 37C -0.3 -1.6 compare
r2a control R2A control -0.3 -2.0 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
phage 36hr PHYTO8 MOI 10 +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.8 compare
phage 24hr PHYTO10 MOI 10 +0.3 +2.2 compare
phage P. phyto corn MOI 1 +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare