Fitness data for BPHYT_RS01455 in Burkholderia phytofirmans PsJN

peptide deformylase
SEED: Peptide deformylase (EC 3.5.1.88)
KEGG: peptide deformylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.3 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -5.3 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -5.2 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -5.1 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -5.0 -1.1 compare
carbon source Sebacic (C) -4.7 -1.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -4.6 -1.0 compare
carbon source Sebacic (C) -4.5 -1.3 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -4.3 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.3 -1.6 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -4.2 -1.2 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -4.1 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.0 -1.0 compare
nitrogen source L-Isoleucine (N) -3.9 -1.1 compare
nitrogen source L-Serine (N) -3.9 -1.0 compare
nitrogen source L-Glutamic (N) -3.9 -1.0 compare
nitrogen source NAG (N) -3.8 -1.3 compare
carbon source Phenylacetic 5 mM (C) -3.6 -1.0 compare
phage 24hr PHYTO4 MOI 10 +3.6 +5.2 compare
phage P. phyto PHYTO2 MOI 1 +4.0 +5.2 compare