Fitness data for BPHYT_RS01275 in Burkholderia phytofirmans PsJN

DNA-directed DNA polymerase
SEED: DNA polymerase IV (EC 2.7.7.7)
KEGG: DNA polymerase IV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 36hr PHYTO6 MOI 0.1 -0.9 -2.6 compare
vitamin No vitamins t1 -0.8 -3.1 compare
phage 24hr PHYTO3 MOI 10 -0.7 -2.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.6 -2.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
vitamin With vitamins t2 -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.8 compare
nophagecontrol 24hr Phyto Lib Only +0.5 +1.8 compare
motility outer cut, LB soft agar motility assay +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.0 compare
phage 36hr PHYTO7 MOI 0.1 +0.6 +2.1 compare
phage 36hr PHYTO8 MOI 10 +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.2 compare
phage 24hr PHYTO4 MOI 10 +0.7 +2.3 compare
phage 24hr PHYTO11 MOI 0.1 +0.8 +3.2 compare