Fitness data for BPHYT_RS01265 in Burkholderia phytofirmans PsJN

lysine transporter LysE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -0.9 -1.9 compare
phage 36hr PHYTO4 MOI 0.1 -0.9 -2.2 compare
phage 24hr PHYTO1 MOI 1 -0.8 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.8 -1.9 compare
phage 36hr PHYTO7 MOI 0.1 -0.8 -2.4 compare
phage 36hr PHYTO2 MOI 1 -0.7 -2.0 compare
carbon source Malonic (C) -0.7 -2.6 compare
phage 36hr PHYTO9 MOI 1 -0.7 -1.6 compare
phage 24hr PHYTO11 MOI 1 -0.7 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
motility inner cut, LB soft agar motility assay -0.6 -2.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -1.7 compare
carbon source L-Fucose (C) +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.3 compare
r2a control R2A control +0.8 +1.6 compare
motility outer cut, LB soft agar motility assay +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.2 compare