Fitness data for BPHYT_RS00770 in Burkholderia phytofirmans PsJN

conjugal transfer protein TraC
KEGG: type IV secretion system protein VirB2

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -4.5 -1.2 compare
stress Paraquat dichloride 0.064 mg/ml -2.8 -1.6 compare
phage 36hr PHYTO6 MOI 10 -2.4 -1.2 compare
carbon source L-Fucose (C) -2.3 -1.3 compare
carbon source Tween 20 (C) -2.2 -1.0 compare
phage 36hr PHYTO11 MOI 0.1 -1.6 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -0.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.5 -0.8 compare
carbon source Protocatechuic Acid (C) -1.5 -0.9 compare
carbon source Phenylacetic 5 mM (C) -1.5 -0.8 compare
carbon source NAG (C) -1.4 -1.6 compare
phage 36hr PHYTO8 MOI 0.1 -1.4 -1.1 compare
carbon source Xylitol (C) -1.3 -1.2 compare
lb LB -1.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -0.7 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.2 -0.6 compare
nitrogen source L-Asparagine (N) +1.4 +1.6 compare
carbon source 2-Deoxy-D-Ribose (C) +1.6 +1.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +2.4 +3.1 compare