Fitness data for BPHYT_RS00750 in Burkholderia phytofirmans PsJN

SpoVT/AbrB domain-containing protein
SEED: VapB protein (antitoxin to VapC)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.1 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.0 -1.5 compare
nitrogen source Uridine (N) -0.9 -1.3 compare
stress Bacitracin 0.25 mg/ml -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.0 compare
carbon source D-Glucose (C) +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.0 compare
phage 24hr PHYTO3 MOI 10 +0.8 +2.1 compare
phage 24hr PHYTO6 MOI 1 +0.8 +2.4 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.9 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.2 compare
phage 36hr PHYTO6 MOI 0.1 +1.0 +3.2 compare
motility outer cut, LB soft agar motility assay +1.1 +2.4 compare
carbon source Malonic (C) +1.1 +1.9 compare
motility inner cut, LB soft agar motility assay +1.2 +1.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +1.3 +2.6 compare