Fitness data for BPHYT_RS00160 in Burkholderia phytofirmans PsJN

ABC transporter substrate-binding protein
SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
KEGG: lysine/arginine/ornithine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.8 -2.6 compare
phage 36hr PHYTO6 MOI 10 -1.7 -2.4 compare
phage 24hr PHYTO2 MOI 1 -1.6 -2.4 compare
phage 36hr PHYTO9 MOI 1 -1.5 -2.7 compare
carbon source Protocatechuic Acid (C) -1.5 -2.9 compare
phage 24hr PHYTO8 MOI 1 -1.5 -2.5 compare
carbon source D-Glucose (C) -1.5 -2.3 compare
phage 24hr PHYTO10 MOI 1 -1.3 -2.2 compare
carbon source D-Galacturonic Acid (C) -1.3 -1.2 compare
carbon source Suberic (C) -1.3 -2.8 compare
phage 24hr PHYTO11 MOI 0.1 -1.3 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.2 compare
carbon source Tween 20 (C) -1.2 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.1 -1.1 compare
phage 36hr PHYTO3 MOI 1 -1.1 -1.9 compare
phage 36hr PHYTO10 MOI 10 -1.1 -1.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.1 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +3.3 compare