Fitness data for BPHYT_RS00095 in Burkholderia phytofirmans PsJN

AraC family transcriptional regulator
SEED: transcriptional regulator, AraC type; possible DNA gyrase inhibitor
KEGG: AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.3 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.4 compare
phage 24hr PHYTO6 MOI 10 -0.5 -2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -1.8 compare
motility inner cut, LB soft agar motility assay -0.4 -2.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -2.2 compare
phage 36hr PHYTO8 MOI 10 -0.4 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.4 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 -1.6 compare
motility inner cut, LB soft agar motility assay -0.4 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.6 compare
phage P. phyto corn MOI 0.1 +0.3 +1.8 compare
phage 24hr PHYTO9 MOI 0.1 +0.4 +2.1 compare
phage 24hr PHYTO1 MOI 1 +0.4 +1.6 compare
phage 36hr PHYTO4 MOI 1 +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare