Fitness data for BBR_RS17565 in Bifidobacterium breve UCC2003

proteasome accessory factor PafA2
SEED: Pup ligase PafA' paralog, possible component of postulated heterodimer PafA-PafA'

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 -0.5 -2.3 compare
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5 -2.6 compare
stress Recovery broth with 5-Fluorouracil 0.2 mM -0.4 -2.6 compare
mrs timecourse MRS Time48hr -0.4 -2.1 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day2 -0.3 -2.3 compare
mouse preculture cage3; mouse3; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.3 +2.2 compare
nutrient dropout CDM1 without Cytosine +0.3 +2.8 compare
nutrient dropout CDM1 without Alanine +0.4 +2.6 compare
nutrient dropout control CDM1 +0.4 +2.7 compare
nutrient dropout CDM1 without Aspartate +0.4 +3.1 compare
nutrient dropout CDM1 without Nicotinate +0.4 +2.9 compare
nutrient dropout CDM1 without Asparagine +0.4 +2.7 compare
nutrient dropout CDM1 without Histidine +0.4 +2.8 compare
nutrient dropout CDM1 without Glycine +0.4 +2.1 compare
nutrient dropout control CDM1 +0.4 +2.9 compare
nutrient dropout CDM1 without Adenine +0.4 +3.3 compare
nutrient dropout CDM1 without Pyridoxamine +0.4 +3.7 compare
stress Recovery broth with Benzethonium chloride 0.1 mM +0.4 +2.8 compare
nutrient dropout CDM1 without Adenine +0.5 +3.1 compare
nutrient dropout CDM1 without Isoleucine +0.5 +3.8 compare