Fitness data for BBR_RS10855 in Bifidobacterium breve UCC2003

class C sortase
SEED: Sortase A, LPXTG specific
KEGG: sortase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress timecourse MRS + carbenicillin Time48hr -0.5 -3.2 compare
chicken coculture chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5 -2.6 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day4 -0.4 -2.5 compare
nutrient dropout CDM1 without Phenylalanine -0.4 -2.1 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 -0.4 -2.2 compare
nutrient dropout CDM1 without Proline -0.4 -2.6 compare
nutrient dropout control CDM1 -0.4 -2.6 compare
nutrient dropout CDM1 without Threonine -0.3 -2.8 compare
nutrient dropout CDM1 without Proline -0.3 -2.5 compare
nutrient dropout CDM1 without Glutamine -0.3 -2.7 compare
stress timecourse MRS + carbenicillin Time3hr -0.3 -2.3 compare
nutrient dropout control CDM1 -0.3 -2.4 compare
nutrient dropout CDM1 without Isoleucine -0.3 -2.5 compare
mouse preculture cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.3 -1.5 compare
nutrient dropout CDM1 without Uracil -0.3 -2.2 compare
nutrient dropout control CDM1 -0.3 -2.4 compare
stress timecourse MRS + kanamycin Time48hr -0.3 -1.8 compare
nutrient dropout CDM1 without Tryptophan -0.3 -2.3 compare
stress Recovery broth with Gentamicin 0.4 mM +0.3 +1.8 compare
mouse mouse 10; day 1; diet=PolysaccharideDeficient; sample=FecalPellet +0.3 +1.7 compare