Fitness data for BBR_RS10820 in Bifidobacterium breve UCC2003

carbohydrate ABC transporter permease
SEED: putative sugar transport integral membrane protein
KEGG: cellobiose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source reconstituted MRS with D-Cellobiose 29 mM -3.6 -18.3 compare
carbon source reconstituted MRS with D-Cellobiose 29 mM -3.2 -15.7 compare
carbon source reconstituted MRS with PreticX-prebiotic 0.5 %w/v -1.0 -7.0 compare
nutrient dropout CDM1 without Phenylalanine -0.7 -3.3 compare
carbon source reconstituted MRS with PreticX-prebiotic 0.5 %w/v -0.7 -4.7 compare
nutrient dropout CDM1 without Glycine -0.5 -2.5 compare
nutrient dropout CDM1 without Alanine -0.5 -3.9 compare
nutrient dropout CDM1 without Biotin -0.5 -3.7 compare
nutrient dropout control CDM1 -0.5 -3.7 compare
mouse preculture cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.5 -2.3 compare
nutrient dropout CDM1 without Isoleucine -0.5 -3.4 compare
stress Recovery broth with Ciprofloxacin 0.1 mM -0.4 -2.0 compare
nutrient dropout CDM1 without Histidine -0.4 -3.0 compare
nutrient dropout control CDM1 -0.4 -3.1 compare
nutrient dropout CDM1 without Alanine -0.4 -2.6 compare
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 +0.4 +1.9 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 +0.4 +1.7 compare
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day3 +0.4 +2.1 compare
carbon source reconstituted MRS with Fibersol-2-AG-fiber 0.5 %w/v +0.8 +7.0 compare
carbon source reconstituted MRS with Fibersol-2-AG-fiber 0.5 %w/v +1.0 +9.0 compare