Fitness data for ABZR87_RS21350 in Ralstonia sp. UNC404CL21Col

ligase-associated DNA damage response exonuclease
SEED: mRNA 3-end processing factor
KEGG: putative mRNA 3-end processing factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
rhizosphere rhizosphere sample 9; outgrowth in LB -0.4 -1.8 compare
root root EcoFAB sample 2; outgrowth in LB -0.4 -2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.3 -1.5 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.3 -0.9 compare
soil soil sample 5; outgrowth in LB -0.2 -1.6 compare
carbon source succinate (C) -0.2 -1.3 compare
root root EcoFAB sample 1; outgrowth in LB -0.2 -1.4 compare
nitrogen source nitrogen source nitrate 20mM +0.2 +1.2 compare
carbon source Pimelic (C) +0.2 +1.5 compare
carbon source Protocatechuic Acid (C) +0.2 +1.7 compare
nitrogen source nitrogen source nitrate 5mM +0.2 +1.2 compare
phage Ra3_1 +0.3 +1.6 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.3 +1.1 compare
carbon source butyrate (C) +0.3 +1.4 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 +1.5 compare
carbon source Sebacic (C) +0.3 +1.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.3 compare
root root sample 6; outgrowth in LB +0.5 +2.7 compare