Fitness data for ABZR87_RS21090 in Ralstonia sp. UNC404CL21Col

TRAP transporter substrate-binding protein
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
rhizosphere rhizosphere sample 9; outgrowth in LB -0.4 -1.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.3 -1.6 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.4 compare
carbon source Octanoic (C) -0.3 -0.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.6 compare
soil soil EcoFAB sample 1; outgrowth in LB -0.3 -1.0 compare
carbon source Glycerol (C) -0.3 -1.8 compare
rhizosphere rhizosphere sample 6; outgrowth in LB -0.2 -1.4 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -1.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.0 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.2 +1.5 compare
carbon source Octanoic (C) +0.3 +1.0 compare
rhizosphere rhizosphere sample 5; outgrowth in LB +0.3 +1.4 compare
carbon source Sebacic (C) +0.3 +1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.5 compare
root root sample 4; outgrowth in LB +0.3 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.7 compare