Fitness data for ABZR87_RS18640 in Ralstonia sp. UNC404CL21Col

ATP-dependent helicase
SEED: ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -2.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.3 -1.3 compare
root root EcoFAB sample 2; outgrowth in LB -0.3 -1.4 compare
root root sample 4; outgrowth in LB -0.3 -1.5 compare
carbon source D-Glucose (C) -0.2 -1.6 compare
carbon source Sebacic (C) -0.2 -0.8 compare
soil soil EcoFAB sample 2; outgrowth in LB +0.2 +1.0 compare
carbon source butyrate (C) +0.2 +1.6 compare
nitrogen source nitrogen source nitrite 1mM +0.2 +1.5 compare
carbon source Protocatechuic Acid (C) +0.2 +1.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.2 +1.0 compare
rhizosphere rhizosphere sample 9; outgrowth in LB +0.3 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.8 compare
phage Ra1_0.1 +0.3 +1.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.3 +1.6 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.3 +1.9 compare
root root sample 6; outgrowth in LB +0.3 +1.6 compare