Fitness data for ABZR87_RS18220 in Ralstonia sp. UNC404CL21Col

D-xylose ABC transporter substrate-binding protein
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: D-xylose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Xylose (C) -1.9 -9.4 compare
carbon source D-Xylose (C) -1.3 -5.0 compare
carbon source D-Xylose (C) -1.0 -5.4 compare
root root sample 6; outgrowth in LB -0.7 -2.4 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.5 -2.1 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -1.2 compare
root root sample 5; outgrowth in LB -0.4 -1.3 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.4 -1.2 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.4 -1.6 compare
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 -1.3 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.3 -2.2 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.3 -1.5 compare
carbon source succinate (C) +0.3 +2.3 compare
carbon source Hexanoic (C) +0.3 +2.0 compare
carbon source Azelaic (C) +0.4 +1.2 compare
carbon source Disodium Glutarate (C) +0.4 +2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.6 compare
carbon source Protocatechuic Acid (C) +0.4 +2.4 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.5 +2.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.5 compare