Fitness data for ABZR87_RS15765 in Ralstonia sp. UNC404CL21Col

branched-chain amino acid ABC transporter permease
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Protocatechuic Acid (C) -2.5 -9.3 compare
carbon source Protocatechuic Acid (C) -1.6 -4.8 compare
carbon source Protocatechuic Acid (C) -1.0 -6.0 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.8 -2.3 compare
carbon source Protocatechuic Acid (C) -0.7 -4.0 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -2.0 compare
carbon source Octanoic (C) -0.5 -1.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.9 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.4 -1.7 compare
carbon source Protocatechuic Acid (C) -0.4 -2.2 compare
carbon source Dodecandioic (C) -0.4 -2.0 compare
root root EcoFAB sample 2; outgrowth in LB -0.4 -1.5 compare
nitrogen source nitrogen source nitrate 5mM -0.4 -1.8 compare
nitrogen source nitrogen source nitrite 5mM -0.3 -2.2 compare
nitrogen source nitrogen source nitrate 20mM -0.3 -1.7 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +1.8 compare