Fitness data for ABZR87_RS14960 in Ralstonia sp. UNC404CL21Col

RNA polymerase sigma factor
SEED: DNA-directed RNA polymerase specialized sigma subunit, sigma24-like
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -1.8 -2.7 compare
root root EcoFAB sample 2; outgrowth in LB -1.0 -2.1 compare
root root sample 5; outgrowth in LB -0.8 -1.3 compare
carbon source Protocatechuic Acid (C) -0.8 -1.9 compare
carbon source Sebacic (C) -0.8 -1.6 compare
root root EcoFAB sample 1; outgrowth in LB -0.7 -2.1 compare
carbon source Lauric (C) -0.7 -3.8 compare
carbon source Protocatechuic Acid (C) -0.7 -2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -1.8 compare
rhizosphere rhizosphere sample 6; outgrowth in LB -0.7 -2.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.6 -1.0 compare
carbon source Heptanoic (C) -0.6 -1.6 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.5 -2.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.9 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -0.5 -0.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.8 compare
micoeukaryotes C.elegans, mixed culture-1 +0.6 +2.6 compare
phage Ra3_1 +0.6 +2.5 compare
nitrogen source nitrogen source nitrite 5mM +0.7 +2.6 compare
carbon source 4-Hydroxybenzoic Acid (C) +1.4 +2.4 compare