Fitness data for ABZR87_RS14255 in Ralstonia sp. UNC404CL21Col

lipid A hydroxylase LpxO
SEED: Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
KEGG: beta-hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Octanoic (C) -3.1 -13.0 compare
carbon source Lauric (C) -2.5 -12.3 compare
carbon source Octanoic (C) -2.3 -8.6 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.6 -4.1 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.6 -3.0 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.6 -3.5 compare
carbon source Heptanoic (C) -0.5 -4.0 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.5 -2.9 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -1.4 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -0.4 -2.0 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.4 -2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.0 compare
carbon source Dodecandioic (C) -0.4 -2.7 compare
root root sample 6; outgrowth in LB -0.4 -1.7 compare
carbon source Heptanoic (C) -0.4 -2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.3 -1.9 compare
carbon source Sebacic (C) +0.3 +1.8 compare
nitrogen source nitrogen source nitrite 5mM +0.3 +2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.4 compare