Fitness data for ABZR87_RS13915 in Ralstonia sp. UNC404CL21Col

Hcp family type VI secretion system effector
SEED: Uncharacterized protein ImpD
KEGG: type VI secretion system secreted protein Hcp

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.1 -3.3 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.9 -1.5 compare
carbon source Octanoic (C) -0.9 -2.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -3.1 compare
rhizosphere rhizosphere sample 9; outgrowth in LB -0.7 -2.2 compare
rhizosphere rhizosphere sample 7; outgrowth in LB -0.7 -2.7 compare
carbon source Sebacic (C) -0.6 -2.2 compare
soil soil sample 2; outgrowth in LB -0.6 -2.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.3 compare
soil soil sample 8; outgrowth in LB -0.5 -2.0 compare
root root sample 4; outgrowth in LB -0.5 -1.7 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.4 -2.0 compare
nitrogen source nitrogen source nitrate 5mM -0.4 -1.4 compare
carbon source Carbon source D-Glucose 10 mM -0.4 -1.8 compare
carbon source Heptanoic (C) -0.4 -1.6 compare
soil soil sample 7; outgrowth in LB -0.3 -1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.3 -1.1 compare
soil soil sample 1; outgrowth in LB +0.4 +1.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.1 +1.2 compare