Fitness data for ABZR87_RS10885 in Ralstonia sp. UNC404CL21Col

23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
SEED: 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)
KEGG: RNA methyltransferase, TrmA family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
root root sample 6; outgrowth in LB -0.5 -2.7 compare
rhizosphere rhizosphere sample 6; outgrowth in LB -0.3 -2.3 compare
carbon source D-Xylose (C) -0.3 -2.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.3 -2.3 compare
carbon source Azelaic (C) -0.3 -1.6 compare
carbon source Glycerol (C) -0.3 -2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3 -1.9 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.7 compare
root root EcoFAB sample 1; outgrowth in LB -0.3 -1.6 compare
carbon source Glycerol (C) -0.2 -2.0 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.2 compare
phage Ra3_0.1 +0.3 +2.3 compare
phage Ra1_0.1 +0.3 +2.2 compare
carbon source Octanoic (C) +0.4 +2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.9 compare
carbon source Octanoic (C) +0.5 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +1.7 compare