Fitness data for ABZR87_RS07015 in Ralstonia sp. UNC404CL21Col

bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
rhizosphere rhizosphere sample 3; outgrowth in LB -0.4 -1.8 compare
carbon source Octanoic (C) -0.3 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -1.6 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -1.3 compare
carbon source propionate (C) +0.2 +1.2 compare
soil soil EcoFAB sample 1; outgrowth in LB +0.2 +0.7 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 +1.3 compare
carbon source Sebacic (C) +0.2 +0.9 compare
carbon source Octanoic (C) +0.2 +1.0 compare
nitrogen source nitrogen source nitrite 0.5mM +0.2 +1.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.2 +1.6 compare
carbon source Dodecandioic (C) +0.2 +1.5 compare
carbon source Pimelic (C) +0.3 +2.3 compare
carbon source Sebacic (C) +0.3 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.2 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +1.7 compare
phage Ra1_0.01 +0.6 +5.0 compare
phage Ra3_0.1 +0.6 +4.6 compare
phage Ra1_0.1 +1.8 +13.8 compare
phage Ra3_1 +2.0 +14.1 compare