Fitness data for ABZR87_RS06875 in Ralstonia sp. UNC404CL21Col

DNA-binding protein YbiB
SEED: Anthranilate phosphoribosyltransferase like (EC 2.4.2.18)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source nitrogen source nitrate 20mM -1.1 -2.9 compare
nitrogen source nitrogen source nitrite 1mM -1.1 -4.2 compare
nitrogen source nitrogen source nitrate 20mM -1.0 -4.1 compare
nitrogen source nitrogen source nitrite 0.5mM -0.8 -2.2 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.8 -2.1 compare
nitrogen source nitrogen source nitrate 5mM -0.8 -1.9 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -1.7 compare
carbon source Hexanoic (C) -0.5 -2.4 compare
root root sample 5; outgrowth in LB -0.5 -1.2 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.5 -2.1 compare
carbon source acetate (C) -0.5 -2.4 compare
nitrogen source nitrogen source nitrate 5mM -0.4 -1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +1.5 compare
root root sample 6; outgrowth in LB +0.5 +1.6 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.7 compare
micoeukaryotes C.elegans, mixed culture-1 +0.6 +2.9 compare
carbon source Octanoic (C) +0.6 +1.3 compare
soil soil EcoFAB sample 1; outgrowth in LB +0.7 +1.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +1.0 +2.0 compare