Fitness data for ABZR87_RS06600 in Ralstonia sp. UNC404CL21Col

transcriptional regulator GcvA
SEED: Glycine cleavage system transcriptional activator GcvA
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -1.2 -3.1 compare
root root EcoFAB sample 2; outgrowth in LB -0.9 -4.0 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.9 -5.2 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.8 -2.9 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.7 -3.0 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.7 -3.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -3.3 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.6 -3.9 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -2.0 compare
carbon source Sebacic (C) -0.6 -2.2 compare
carbon source Octanoic (C) -0.5 -1.9 compare
carbon source L-Glutamic (C) -0.5 -2.6 compare
root root EcoFAB sample 1; outgrowth in LB -0.4 -2.2 compare
carbon source Heptanoic (C) -0.4 -2.2 compare
rhizosphere rhizosphere sample 7; outgrowth in LB -0.4 -2.1 compare
carbon source D-Xylose (C) -0.3 -2.6 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.3 -2.0 compare
nitrogen source nitrogen source nitrite 5mM +0.4 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.9 compare
nitrogen source nitrogen source nitrite 5mM +0.5 +3.5 compare