Fitness data for ABZR87_RS05110 in Ralstonia sp. UNC404CL21Col

ABC transporter substrate-binding protein
SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
phage Ra1_0.1 -0.3 -2.0 compare
carbon source D-Xylose (C) -0.2 -2.0 compare
phage Ra3_1 -0.2 -1.4 compare
carbon source propionate (C) -0.2 -1.4 compare
nitrogen source nitrogen source nitrate 5mM -0.1 -0.9 compare
carbon source Dodecandioic (C) +0.1 +1.2 compare
carbon source Octanoic (C) +0.2 +0.9 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.2 +1.3 compare
soil soil sample 9; outgrowth in LB +0.2 +1.3 compare
soil soil sample 4; outgrowth in LB +0.2 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.2 +1.1 compare
carbon source Azelaic (C) +0.2 +1.2 compare
carbon source Octanoic (C) +0.2 +1.3 compare
nitrogen source nitrogen source nitrite 0.5mM +0.3 +1.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.5 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.6 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.3 +1.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.3 +1.7 compare
root root sample 4; outgrowth in LB +0.4 +2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +3.2 compare