Fitness data for ABZR87_RS05070 in Ralstonia sp. UNC404CL21Col

class I SAM-dependent rRNA methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.3 -2.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3 -2.1 compare
nitrogen source nitrogen source nitrate 5mM -0.3 -1.6 compare
carbon source D-Xylose (C) -0.3 -2.0 compare
nitrogen source nitrogen source nitrite 0.5mM -0.2 -1.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 +1.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.1 compare
carbon source Dodecandioic (C) +0.2 +1.9 compare
carbon source Dodecandioic (C) +0.2 +1.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.2 +1.2 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.3 +1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.3 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.3 +1.5 compare
carbon source Heptanoic (C) +0.3 +1.9 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.1 compare
carbon source Lauric (C) +0.3 +2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.2 compare
root root EcoFAB sample 1; outgrowth in LB +0.4 +2.1 compare
carbon source Octanoic (C) +0.4 +1.9 compare
carbon source Sebacic (C) +0.6 +3.0 compare