Fitness data for ABZR87_RS02600 in Ralstonia sp. UNC404CL21Col

temperature dependent type IV pilus secretin PilQ
SEED: Type IV pilus biogenesis protein PilQ
KEGG: type IV pilus assembly protein PilQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
root root sample 5; outgrowth in LB -0.8 -4.0 compare
root root sample 6; outgrowth in LB -0.7 -3.6 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.5 -4.3 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.4 -3.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -2.4 compare
rhizosphere rhizosphere sample 9; outgrowth in LB +0.4 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.8 compare
phage Ra3_0.01 +0.4 +3.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.5 +2.6 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.9 +6.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +1.4 +11.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +1.5 +11.7 compare
soil soil EcoFAB sample 1; outgrowth in LB +1.5 +8.7 compare
soil soil EcoFAB sample 2; outgrowth in LB +1.6 +13.3 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +2.0 +15.9 compare
phage Ra1_0.01 +2.1 +18.6 compare
phage Ra3_0.1 +2.4 +19.9 compare
phage Ra3_1 +6.2 +52.2 compare
phage Ra1_0.1 +6.3 +56.0 compare