Fitness data for ABZR87_RS00550 in Ralstonia sp. UNC404CL21Col

neutral zinc metallopeptidase
SEED: YpfJ protein, zinc metalloprotease superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -0.3 -1.2 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -0.3 -2.1 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.3 -1.8 compare
root root sample 5; outgrowth in LB -0.3 -1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -1.5 compare
soil soil sample 4; outgrowth in LB -0.2 -1.7 compare
root root sample 6; outgrowth in LB -0.2 -1.1 compare
soil soil sample 1; outgrowth in LB -0.2 -1.6 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.8 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 -1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.2 -1.2 compare
carbon source butyrate (C) +0.2 +1.4 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.1 compare
carbon source Trans-2-methyl-2-butenoic (C) +0.3 +1.7 compare
carbon source Pimelic (C) +0.3 +2.0 compare
carbon source Beta-alanine (C) +0.3 +2.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +2.5 compare