Fitness data for ABZR87_RS00310 in Ralstonia sp. UNC404CL21Col

branched-chain amino acid ABC transporter permease
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Beta-alanine (C) -3.9 -12.7 compare
carbon source Beta-alanine (C) -3.3 -9.7 compare
soil soil EcoFAB sample 1; outgrowth in LB -2.2 -3.6 compare
root root EcoFAB sample 2; outgrowth in LB -1.6 -4.7 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.4 -2.8 compare
root root EcoFAB sample 1; outgrowth in LB -1.2 -4.6 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -1.2 -4.1 compare
root root sample 6; outgrowth in LB -1.1 -3.6 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.1 -4.0 compare
soil soil EcoFAB sample 2; outgrowth in LB -1.1 -3.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -1.1 -3.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -2.8 compare
root root sample 5; outgrowth in LB -1.0 -2.4 compare
root root sample 4; outgrowth in LB -0.9 -3.9 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.8 -3.7 compare
carbon source propionate (C) -0.7 -4.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -2.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.7 -3.6 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.6 -3.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.6 compare