Fitness data for ABIE53_006527 in Paraburkholderia graminis OAS925

polar amino acid transport system permease protein
SEED: Glutamate transport membrane-spanning protein
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -3.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -3.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -1.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -1.8 compare
nitrogen source histamine 2mM N source -0.5 -1.8 compare
carbon source Salicylic and Ethanols -0.5 -2.6 compare
carbon source D-Alanine (C) +0.5 +2.7 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.5 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.3 compare
stress R2A with Clay 500 g/L +0.5 +2.8 compare
carbon source D-Mannose (C) +0.5 +1.8 compare
r2a shaking control R2A shaking control +0.5 +2.3 compare
stress R2A with p-Coumaric 0.5 mM +0.5 +3.3 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +2.1 compare
carbon source Acetylated xylan 10 g/L (C) +0.6 +2.0 compare
nitrogen source Ammonium chloride 0.5 mM (N) +0.6 +2.5 compare
stress R2A with Clay 500 g/L +0.6 +2.5 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +0.6 +2.7 compare
r2a no shaking R2A no shaking +0.7 +3.3 compare
carbon source Shikimic Acid 5 mM (C) +0.7 +3.1 compare