Fitness data for ABIE53_006407 in Paraburkholderia graminis OAS925

peptide/nickel transport system permease protein
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.1 -4.0 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -2.6 compare
stress R2A with Clay 500 g/L -0.8 -3.6 compare
r2a outgrowth control R2A outgrowth control -0.7 -2.5 compare
carbon source L-Proline (C) -0.6 -2.8 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.6 -2.2 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM -0.6 -2.6 compare
carbon source D-Sorbitol (C) -0.5 -2.4 compare
carbon source Pectin 10 g/L (C) -0.5 -2.3 compare
r2a no shaking R2A no shaking -0.5 -2.1 compare
nitrogen source Ammonium chloride 0.5 mM (N) -0.5 -2.5 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.5 -2.0 compare
r2a outgrowth control R2A outgrowth control -0.5 -1.5 compare
carbon source Acetylated xylan 10 g/L (C) -0.5 -1.7 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM +0.5 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.0 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +1.4 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +1.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +3.4 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.2 +3.8 compare