Fitness data for ABIE53_005940 in Paraburkholderia graminis OAS925

alkylated DNA repair dioxygenase AlkB
SEED: Alkylated DNA repair protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -3.0 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.6 compare
plant outgrowth control Plant outgrowth control -0.5 -2.5 compare
carbon source D-Mannose (C) -0.5 -2.1 compare
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM -0.4 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.8 compare
carbon source D-Glucose (C) -0.4 -2.6 compare
carbon source D-Galactose (C) -0.4 -2.5 compare
soil extract Abietic Acid 5 mM in soil extract -0.4 -2.1 compare
carbon source D,L-Malic Acid (C) -0.4 -1.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.1 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +0.4 +2.0 compare
stress R2A with Chloride 200 mM +0.4 +1.9 compare
carbon source Laminarin 10 g/L (C) +0.4 +1.7 compare
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia +0.4 +2.2 compare
r2a no shaking R2A no shaking +0.4 +1.8 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.5 compare
stress R2A with Chloride 200 mM +0.5 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.3 compare