Fitness data for ABIE53_005897 in Paraburkholderia graminis OAS925

prolyl 4-hydroxylase
SEED: Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
KEGG: prolyl 4-hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.6 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.6 -3.2 compare
soil extract 4-Hydroxybenzoic Acid 5 mM in soil extract -0.5 -2.9 compare
carbon source Citric Acid 20 mM (C) -0.5 -2.6 compare
r2a outgrowth control R2A outgrowth control -0.5 -1.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -1.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.5 compare
stress M9 with Chloride 200 mM +0.4 +1.8 compare
stress M9 with Chloride 200 mM +0.5 +2.3 compare
stress Growth in presence of pinene +0.5 +2.3 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +0.5 +2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.3 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +0.5 +2.2 compare
r2a outgrowth control R2A outgrowth control +0.5 +2.1 compare
stress M9 with Chloride 200 mM +0.6 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.5 compare
stress Growth in presence of pinene +0.6 +2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.7 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +2.5 compare